BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024F11SP1|AL428258
(1043 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig415 1673 0.0
>3x_Contig415
Length = 1171
Score = 1673 bits (843), Expect = 0.0
Identities = 843/843 (100%)
Strand = Plus / Plus
Query: 1 gatcagtatttaacgcgtattcccattgctcttgagctctgtcccaatccacaatggtac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gatcagtatttaacgcgtattcccattgctcttgagctctgtcccaatccacaatggtac 379
Query: 61 tattttccactataggtttaatttccatcccagcgcgaggaaacaaaaggggctgctcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tattttccactataggtttaatttccatcccagcgcgaggaaacaaaaggggctgctcat 439
Query: 121 tgaaaatgcgcttagtatcaccatctgtttctacattcccgtagctcgaaggcattatcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgaaaatgcgcttagtatcaccatctgtttctacattcccgtagctcgaaggcattatcg 499
Query: 181 attggggacagtctgtccccgaatagccaatgtttgtcacaaaagaacctggatctatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 attggggacagtctgtccccgaatagccaatgtttgtcacaaaagaacctggatctatca 559
Query: 241 caatagcatttatttcatctccaccgtatacttgtaacgcagggtttgacatgtttgaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 caatagcatttatttcatctccaccgtatacttgtaacgcagggtttgacatgtttgaag 619
Query: 301 aaaaagctaccaatagttacagttagagctaattcagattctattggtcaatatggctta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aaaaagctaccaatagttacagttagagctaattcagattctattggtcaatatggctta 679
Query: 361 aatggaacggtgtataaactaattgtatcctaacttctgtcactctatgtggcttaattc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aatggaacggtgtataaactaattgtatcctaacttctgtcactctatgtggcttaattc 739
Query: 421 aaacggaaccagcattgtctgtttgtttaaagctttctgataattatcaaaatcattacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aaacggaaccagcattgtctgtttgtttaaagctttctgataattatcaaaatcattacc 799
Query: 481 cggatattagctttaatttcgacttctcttttaatgtttgaagaaagtatataaagattt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 cggatattagctttaatttcgacttctcttttaatgtttgaagaaagtatataaagattt 859
Query: 541 aaagtatcgttcgtttatgttttacagtacgttgcgtttggaatatgttgataattatat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 aaagtatcgttcgtttatgttttacagtacgttgcgtttggaatatgttgataattatat 919
Query: 601 atagttgatgtaacatcagtctgacgaggggaggcagtcaaataaaaaaatgtagcgtta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 atagttgatgtaacatcagtctgacgaggggaggcagtcaaataaaaaaatgtagcgtta 979
Query: 661 gaaatgggaatgtaaatttttttatcctttcttcatagagttttaatttcgtgatcaaca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 980 gaaatgggaatgtaaatttttttatcctttcttcatagagttttaatttcgtgatcaaca 1039
Query: 721 acatcaaccaaagtttcaagttccagtttggaacgagctgcttgtagccaatcgtcagct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1040 acatcaaccaaagtttcaagttccagtttggaacgagctgcttgtagccaatcgtcagct 1099
Query: 781 tctagtctagaccagccttgtagttgcacgacatcttcgactgccttgtcaagtctgttg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1100 tctagtctagaccagccttgtagttgcacgacatcttcgactgccttgtcaagtctgttg 1159
Query: 841 agt 843
|||
Sbjct: 1160 agt 1162
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8533
Number of Sequences: 1807
Number of extensions: 8533
Number of successful extensions: 82
Number of sequences better than 1.0e-20: 1
length of query: 1043
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1027
effective length of database: 10,329,639
effective search space: 10608539253
effective search space used: 10608539253
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)